Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSRVGKKLLEIPSDVTVTLNDNNTVAVKGPKGELTRTFHPDMEIKVEDNVLTVARPSDQKEHRALHGTTRSLLGNMVEGVSKGFERGLELVGVGYRASKSGNKLVLNVGYSHPVEIVPEEGIEIEVPSQTKVVVKGTDKERVGAIAANIRAVRSPEPYKGKGIRYEGEVVRRKEGKSAK
1C04 Chain:B ((7-170))
-------PIEIPAGVTVTVN-GNTVTVKGPKGELTRTFHPDMTITVEGNVITVTRPSDEKHHRALHGTTRSLLANMVEGVSKGYEKALELVGVGYRASKQGKKLVLSVGYSHPVEIEPEEGLEIEVPSQTKIIVKGADKQRVGELAANIRAVRPPEPYKGKGIRYEGELVRL-------
General information:
TITO was launched using:
RESULT:
Template:
1C04.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -55064 for 1196 contacts (-46.0/contact) +
2D Compatibility (PS) -18330 + (NN) -10830 + (LL) 592
1D Compatibility (HY) -18800 + (ID) 6600
Total energy: -109032.0 ( -91.16 by residue)
QMean score : 0.633
(partial model without unconserved sides chains):
PDB file :
Tito_1C04.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1C04-query.scw
PDB file :
Tito_Scwrl_1C04.pdb
: