Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MITKTSKNAARLKRHARVRAKLSGTAERPRLNVFRSNKHIYAQIIDDVNGVTLASASTLDKDLNVESTGDTSAATKVGELVAKRAAEKGISDVVFDRGGYLYHGRVKALADAAREAGLKF
4WF9 Chain:L ((2-110))
-ISKIDKNKVRLKRHARVRTNLSGTAEKPRLNVYRSNKHIYAQIIDDNKGVTLAQASSKDSDIATTAT-KVELATKVGEAIAKKAADKGIKEIVFDRGGYLYHGRVKALAE---------
General information:
TITO was launched using:
RESULT:
Template:
4WF9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3563 for 737 contacts (-4.8/contact) +
2D Compatibility (PS) -11614 + (NN) -3162 + (LL) 872
1D Compatibility (HY) -8400 + (ID) 3850
Total energy: -29717.0 ( -40.32 by residue)
QMean score : 0.301
(partial model without unconserved sides chains):
PDB file :
Tito_4WF9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4WF9-query.scw
PDB file :
Tito_Scwrl_4WF9.pdb
: