Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGVKKEKGRKRFRKRKTFGNQILPLELL-----IEKNKREIINSAELMEEIYMKIDEKHTQCVTK
2K5C Chain:A ((17-43))
---------------------PLKWEELIEEMLIIENFEEIVKDRERF-----------------
General information:
TITO was launched using:
RESULT:
Template:
2K5C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2038 for 68 contacts (-30.0/contact) +
2D Compatibility (PS) -2305 + (NN) 252 + (LL) 2780
1D Compatibility (HY) -1600 + (ID) 400
Total energy: -3311.0 ( -48.69 by residue)
QMean score : 0.139
(partial model without unconserved sides chains):
PDB file :
Tito_2K5C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2K5C-query.scw
PDB file :
Tito_Scwrl_2K5C.pdb
: