Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIGQKAWVNIGKTEFILLLVVGILTI-INVLTADGEKRTFHSPKKKNINHLTLYDCVSPEVQNSINETGRVTNFF
5DM6 Chain:R ((18-52))
-KGDTVIVLSGKHKGQTGKVLLALPRDQKVVV-EGVN--------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
5DM6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12140 for 166 contacts (-73.1/contact) +
2D Compatibility (PS) -3605 + (NN) 775 + (LL) 2236
1D Compatibility (HY) 1200 + (ID) 400
Total energy: -11934.0 ( -71.89 by residue)
QMean score : 0.126
(partial model without unconserved sides chains):
PDB file :
Tito_5DM6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-5DM6-query.scw
PDB file :
Tito_Scwrl_5DM6.pdb
: