Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAAARKSNTRKRRVKKNIESGIAHIRSTFNNTIVTITDTHGNAISWSSAGALGFRGSRKSTPFAAQMAAETAAKGSIEHGLKTLEVTVKGPGSGREAAIRALQAAGLEVTAIRDVTPVPHNGCRPPKRRRV
4A2I Chain:K ((12-128))
--------------RKQVSDGVAHIHASFNNTIVTITDRQGNALGWATAGGSGFRGSRKSTPFAAQVAAERCADAVKEYGIKNLEVMVKGPGPGRESTIRALNAAGFRITNITDVTPIPHNGCRPPKKRRV
General information:
TITO was launched using:
RESULT:
Template:
4A2I.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26182 for 867 contacts (-30.2/contact) +
2D Compatibility (PS) -13006 + (NN) -10193 + (LL) 1304
1D Compatibility (HY) -9200 + (ID) 3900
Total energy: -61177.0 ( -70.56 by residue)
QMean score : 0.525
(partial model without unconserved sides chains):
PDB file :
Tito_4A2I.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4A2I-query.scw
PDB file :
Tito_Scwrl_4A2I.pdb
: