Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNQNQLISVEDIVFRYRKDAERR--ALDGVSLQVYEGEWLAIVGHNGSGKSTLARALNGLILPESGDIEVAGIQLTEE--SVWEVRKKIGMVFQNPDNQFVGTTVRDDVAFGLENNGVPREEMIERVDWAVKQVNM-QDFLDQEPHHLSGGQKQRVAIAGVIAARPDIIILDEATSMLDPIGREEVLETVRHLKEQGMATVISITHDLNEAAK-ADRIIVMNGGKKYAEGPPEEIFKLNKELVRIGLDLPFSFQLSQLLRENGLALEENHLTQEGLVKELWTLQSKM
4MKI Chain:B ((5-274))----MPIKVENVSFIYNEGTPYATVALKDINFSIDDEEFVGIIGHTGSGKSTLIQQLNGLLKPSKGKIYINGIDITDKKVSLKDIRKQVGLVFQYPEYQLFEETVFKDIAFGPSNLGLSEEEVKERVYEAMEIVGISKELADKSPFELSGGQKRRVAIAGILAMRPKILILDEPTAGLDPKGKQEILNKIKEIHDKYKMITILVSHNMEDIARIADKIIVMNRGKIELIGTPREVFREAERLEKIGLSVPQITSLARELRKRGVPIPPDVLTIE-------------


General information:
TITO was launched using:
RESULT:

Template: 4MKI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -119567 for 2112 contacts (-56.6/contact) +
2D Compatibility (PS) -29194 + (NN) -15188 + (LL) 1456
1D Compatibility (HY) -20800 + (ID) 5450
Total energy: -188743.0 ( -89.37 by residue)
QMean score : 0.512

(partial model without unconserved sides chains):
PDB file : Tito_4MKI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4MKI-query.scw
PDB file : Tito_Scwrl_4MKI.pdb: