Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTPFERLALYDINASIKEGSYVAVIGHTGSGKSTLLQHLNGLLKPTKGQISLGSTVIQAGKKNKDLKKLRKKVGIVFQFPEHQLFEETVLKDISFGPMNFGVKKEDAEQKAREMLQLVGLSEELLDRSPFELSGGQMRRVAIAGVLAMDPEVLVLDEPTAGLDPRGRKEIMDMFYELHQRGNLTTILVTHSMEDAAAYADEMIVMHKGTIQASGSPRDLFLKGEEMAGWGLDLPETIKFQRHLEAALGVRFNEPMLTIEDAAAEIRALFQGEKTL |
| 5D3M Chain:B ((16-282)) | --SPLEAIGLDQLNFSLEEGKFIALVGHTGSGKSTLMQHFNALLKPTSGKIEIAGYTITPETGNKGLKDLRRKVSLAFQFSEAQLFENTVLKDVEYGPRNFGFSEDEAREAALKWLKKVGLKDDLIEHSPFDLSGGQMRRVALAGVLAYEPEIICLDEPAAGLDPMGRLEMMQLFKDYQAAGH-TVILVTHNMDDVADYADDVLALEHGRLIKHASPKEVFKDSEWLQKHHLAEPRSARFAAKLEAA-GLKLPGQPLTMPELADAIKQSLK----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5D3M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -118052 for 2080 contacts (-56.8/contact) +
2D Compatibility (PS) -29330 + (NN) -15441 + (LL) 848
1D Compatibility (HY) -25200 + (ID) 6300
Total energy: -193475.0 ( -93.02 by residue)
QMean score : 0.555
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