Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAEVLSFMDVKRQKDFELEKNLLKELSLRQIIQSVKDCLEPLFPFLHDERDIITEGCIDFAIEAYLLGGRFGIFGYYGESMQSISARSAREEEELRMEFFDYLYNWIHEQYATFDKNTVYEAARKFIKDWWTAGFVQREKQCKLRMR |
4J1Q Chain:A ((108-188)) | ---------------------------------------------------IIIQAIVPLEKEKQLFAGVSGLFKTAEIEFSKLTAQVI--EIEKPEEMIDLHLKLKDDSRRPFDKQIRYEAGYRFVKGW----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4J1Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 4992 for 468 contacts (10.7/contact) +
2D Compatibility (PS) -7452 + (NN) 5601 + (LL) 6456
1D Compatibility (HY) -4000 + (ID) 1050
Total energy: 4547.0 ( 9.72 by residue)
QMean score : -0.220
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