Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYSKQWTRIILITSPFAIALSLLLSILYGAKHLSTDIVFTSLIHFDPGNTDHQIIWHSRIPRAAGALLIGAALAVSGALMQGITRNYLASPSIMGVSDGSAFIITLCMVLLPQSSSIEMMIYSFIGSALGAVLVFGLAAMM--PNGFTPVQLAIIGTVTSMLLSSLSAAMSIYFQISQDLS---FWYSARLHQMSPDFLKLAAPFFLIGIIMAIS-LSKKVTAVSLGDDISKSLGQKKKTIKIMAMLSVIILTGSAVALAGKIAFVGLVVPHITRFLVGSDYSRLIPCSCILGGIFLTLCDLASRFINYPFETPIEVVTSIIGVPFFLYLIKRKGGEQNG |
| 2QI9 Chain:A ((52-324)) | ------------------------------------------------------VWQIRLPRTLAVLLVGAALAISGAVMQALFENPLAEPGLLGVSNGAG-VGLIAAVLLGQG---QLPNWALGLSAIAGALIITLILLRFARRHLSTSRLLLAGVALGIISSALMT-WAIYFSTSVDLRQLMYWMMGGFGGV--DWRQSWLMLALIPVLLWISSQSRPMNMLALGEISARQLGLPLWFWRNVLVAATGWMVGVSVALAGAIGFIGLVIPHILRLSGLTDHRVLLPGCALAGASALLLADIVARLALAAAELPIGVVTATLGAPVFIWLLLKA------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2QI9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -249345 for 2246 contacts (-111.0/contact) +
2D Compatibility (PS) -27166 + (NN) -2555 + (LL) 4252
1D Compatibility (HY) -20800 + (ID) 4300
Total energy: -299914.0 ( -133.53 by residue)
QMean score : 0.298
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