Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKTKTLFIFSAILTLSIFAPNETFAQTAGNLIEPKIINAETAQFSTKKLRKVDQMIERDIAA-GFPGAVLVVVKDGRIIKKAAYGYSKKYEGSELLRRP---AKMKTRTMFDLASNTKMYATNFALQRLVSQGKLDVYEKVSAYLPGFKD-QPGDLIKG-----------KDKIRVIDVLQHQSGLPSSFYFYTPEK----AGKYYSQERDKT--IEYLTKIPLDYQTGTKHVY---SDIGYMLLGCIVEKLTGKPLDVYTEQELYKPLRLKHTLY---NPLQKGFKPKQFAATERMGNTRDGVIQFPNIRTNTLQGEVHDEKAFYSMDGVSGHAGLFSNADDMAILLQVMLNKGSYRNISLFDQKTADLFTA---PSATD--------PTFALGWRRNGSKSMEWMFGPHASENAYGHTGW---TGTVTIIDPAYNLGIALLTNKKHTPVIDPEENPNVFEGDQFPTGSYGSVITAIYEAME |
4IVK Chain:A ((25-408)) | ------------------------AEGPVTATKPK-----EAGFTSEGLARIDAYLKNEIQAKTMPGAVMMIKRNGETAYFSSFG----------LRDPDTKEPMTAETIFRIYSMSKPITTVAAMM-LVEEGKLQLDEPVSKYIPSFANVKVGVETKGENGMALETGPVKRAITIQDLMRHTSGITYGFVGDGLVKKAYIASNLFDGDFDNAEFAERIAKLPLVYQPGTTWDYGHSTDI----LGRVVEVVSGKSLYQFEKERLLDPLGMKDTGFYVTDPAKKSLVAEAMPNDRKIGGS-----------------EMFDPRVQKKWE--PGGQGMVSTIGDYARFTQMVLNGGTLDGKRYLSPKTIAYMGSNHIPQASGIVPGAYYLPGPGVGFGLGFAVRTEAGVTP--VEGSVGDLSWGGAGGTVFWIDPKENLTVVFM-----APMVSP----------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4IVK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -69981 for 2779 contacts (-25.2/contact) +
2D Compatibility (PS) -35997 + (NN) -8403 + (LL) 6252
1D Compatibility (HY) -21600 + (ID) 5350
Total energy: -135079.0 ( -48.61 by residue)
QMean score : 0.412
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