Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSCPEQIVQLMHMHLDGDILPKDEHVLNEHLETCEKCRKHFYEMEKSIALVRSTSHVEAPADFTANVMAKLPKEKKRASVKRWFRTHPVIAAAAVFIILMGGGFFNSWHNDHNFSVSKQPNLVVHNHTVTVPEGETVKGDVTVKNGKLIIKGKIDGDVTV---------VNGEKYMASAGQVTGQIEEINQLFDWTWYKMKSAGKSVLDAFNPNGEE |
3UPY Chain:A ((96-198)) | -------------------------------------------------------------------------------------------------------------TDDNDLILSNPLIDVIIDATGIPEVGAETGIAAIRNGKHLVMMNVEADVTIGPYLKAQADKQGVIYSLGAGDEPSSCMELIEFVSALGYEVVSAGKGKNNPLN----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3UPY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 19997 for 528 contacts (37.9/contact) +
2D Compatibility (PS) -9446 + (NN) 2901 + (LL) 8748
1D Compatibility (HY) -2000 + (ID) 1200
Total energy: 19000.0 ( 35.98 by residue)
QMean score : 0.088
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