Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKRNQKEWESVSKKGLMKPGGTSIVK---AAGCMGCWASKSIAMTRVCALPHPAMRAI
3SUK Chain:A ((62-83))
------------------IGASSDIGGFNSPACGNCYTIS------------------
General information:
TITO was launched using:
RESULT:
Template:
3SUK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -877 for 61 contacts (-14.4/contact) +
2D Compatibility (PS) -2035 + (NN) -658 + (LL) 3192
1D Compatibility (HY) -800 + (ID) 200
Total energy: -1378.0 ( -22.59 by residue)
QMean score : 0.017
(partial model without unconserved sides chains):
PDB file :
Tito_3SUK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3SUK-query.scw
PDB file :
Tito_Scwrl_3SUK.pdb
: