Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKGYRILIVEDDVMIGDLLQKILQREGYRVIWKTDGADVLSVIQKVD--LVIMDVMLPGEDGYQMSAKIKKLGLGIPVIFLSARNDMDSKLQGLQIG-EDYMVKPFDPRELLLRMRNMLEHHYGTFTQIKHLYIDAVTKKVFNESLHDEVLFTAIERKIFFYLYENRDSILTKEHFFEYLWQLEDRNPNIVNVHIKKIRAKINDQAGEMIENIYGEGYRLNTVVKK
1XHE Chain:A ((2-118))
-QTPHILIVEDELVTRNTLKSIFEAEGYDVFEATDGAEMHQILSEYDINLVIMDINLPGKNGLLLARELREQA-NVALMFLTGRDNEVDKILGLEIGADDYITKPFNPRELTIRARNLL-----------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1XHE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -74411 for 827 contacts (-90.0/contact) +
2D Compatibility (PS) -12989 + (NN) -10954 + (LL) 9204
1D Compatibility (HY) -11600 + (ID) 2350
Total energy: -103100.0 ( -124.67 by residue)
QMean score : 0.635
(partial model without unconserved sides chains):
PDB file :
Tito_1XHE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XHE-query.scw
PDB file :
Tito_Scwrl_1XHE.pdb
: