Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNSAHNKNETTFQRSMKSRHLFMLSLGGVIGTGLFLSSGYTIQQAGPAGTILAYLV------GAGIVYLVMLCLGELSVAMPVTGAFHTYAAKYIGPGTGFTVAWLYWL-TWTVALGSEFTAAGLLMQRWFP---HTSVWMWSAVFALFIF-LLNAFSVKFFAESEFWFSSIKVLAIVLFILLGGSAMFGIIPIKGGEAAPMLSNFTAEGGLFPNGFVPILMTMLSVNFAFSGTELIGIAAGESVDPDKTIPKAIKTTVWRLSLFFVGTIFVLSGLIPIQDAGVIKSPFVAVFDRVGVPYAADIMNFVILTAILSAANSGLYASSRMLWSLSKEKTLHPTFAKLTSKGTPFNALVFSMIGGILSLLSSVFAPDTVYVVLV-SISGFAVVVVWMGIAASQFMFRKRYIEAGNKVTDLKYRTPLYPFVPIAAFLLCLASVVGIAFDPNQRIALYCGVPFMAIC--YAIYYVKNRKSQPAADMTHSK
3LRC Chain:A ((21-435))--------------------------GNIMGSGVFLLPANLASTGGIA--IYGWLVTIIGALGLSMVY------AKMSFLDPSPGGSYAYARRCFGPFLGYQTNVLYWLACWIGNIAMVVIGVGYL-SYFFPILKDPLVLTITCVVVLWIFVLLNIVGPKMITRVQ------AVATVLALIPIVGIAVFGWFWFRG-ETYMAAWNVSGLGT-----FGAIQSTLNVTLWSFIGVESASVAAGVVKNPKRNVPIATIGGVLIAAVCYVLSTTAIMGMIPN--------------------TAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGLFPPIFARVNKAGTPVAGLIIVGILMTIFQLSSISPNATKEFGLVSSVSVIFTLVPYLYTCAALLLLGHGHFG--------KAR-PAYLAVTTIAFLYCIWAVVG----SGAKEVMWSFVTLMVITAMYALNYNRLHKNP---------


General information:
TITO was launched using:
RESULT:

Template: 3LRC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1942 -271666 -139.89 -713.03
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain A : 0.71

3D Compatibility (PKB) : -139.89
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.71
QMean score : 0.267

(partial model without unconserved sides chains):
PDB file : Tito_3LRC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3LRC-query.scw
PDB file : Tito_Scwrl_3LRC.pdb: