Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTNLNEKQLITEIVGLARSQGLTVHSENAQLNETGMDFQVVFAKDDTGMPWVLRKPRRSDVVERASAEGITLAFLRANLTADVPDWRIHTPELIAYPMLKGTPAAGIDLEQKQYVWNMDHQPPSDDFVRTLADILAELHGTDQISAGQSGIEVIRPEDFRQMTADSMVDVKNKLGVSTTLWERWQKWVDD--------DAYWPGFSSLIHGDLHPPHILID-QNGRVTGLLDWTEAKVADPAKDFV---LYQTIFGEKETARLLEYYDQAGGRIWAKMQEHISEMQAAYPVEIAKLALQTQQEEHINMALEALGVTSD
4DE4 Chain:A ((142-273))--------------------------------------------------------------------------------------------------------------------------------KDLARFLSELHSIN-ISGFKSNLVL----DFREKINEDNKKIKKLL--SRELKGPQMKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHY---------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4DE4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 327 -47316 -144.70 -394.30
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : -144.70
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.415

(partial model without unconserved sides chains):
PDB file : Tito_4DE4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4DE4-query.scw
PDB file : Tito_Scwrl_4DE4.pdb: