Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTVLWVAAVIALACLNVIQFIMKKKRDGNLAYTADQLSYMLSRDSAGQILLPTDDHALKDLLVNINLIVENRQQISAQFAKTEQSMKRMLTNMSHDLKTPLTVILGYIEAIQSDPNMPD-EERERLLGKLRQKTNELIQMINSFFDLAKLESEDKEIPITKVHMNDICKR--NILHYYDAVQSKGFQAAIDIPDTPVYAQANEEALDRILQNLLSNAIQYG---AAGKLIGLTLSYDERNIAITVWDRGKGISETDQQRVFERLYTLEESRNKAFQGSGLGLTITKRLTEKMGGIISVQSKPYERTAFTITLKRMTY
4JAS Chain:A ((23-247))----------------------------------------------------------------------------------------FIANISHELRTPLTVIKGYAEMIYNSLGELDLSTLKEFLETIIEQSNHLENLLNELLDFSRLERKSLQINREKVDLCDLVESAVNAIKEFASSHNVNVLFESNVP-CPVEAYIDPTRIRQVLLNLLNNGVKYSKKDAPDKYVKVILDEKDGGVLIIVEDNGIGIPDHAKDRIFEQFYRVDSSLTYEVPGTGLGLAITKEIVELHGGRIWVESEVGKGSRFFVWIPK---


General information:
TITO was launched using:
RESULT:

Template: 4JAS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 894 -100922 -112.89 -460.83
target 2D structure prediction score : 0.74
Monomeric hydrophicity matching model chain A : 0.68

3D Compatibility (PKB) : -112.89
2D Compatibility (Sec. Struct. Predict.) : 0.74
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.481

(partial model without unconserved sides chains):
PDB file : Tito_4JAS.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4JAS-query.scw
PDB file : Tito_Scwrl_4JAS.pdb: