Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDQTRTLGKTKLKVKRIGFGANAVGGHNLFPNLNDETGKDLVRTALDGGVNFIDTAFIYGLGRSEELIGEVVQERGVRNELIIATK-GAH----KEVDGSIELDNSREFLRSEVEKSLKRLKTDYIDLYYVHFPDGKTPLAEVAGTLKELKDEGKIKAIGASNLDYQQLQDFNADGYLEVFQAEYSLIQRDAEKELLPYCEKQGISFIPYFPLASGLLTGKFTQDTVF--DDFRKDKPQFQGETFIHNLKKVDKLKAVAEEKQADTAHVALAWLLTRPAIDAIIPGAKRPEQLQDNLKTLNIELTEDEVNFISDIFK
3N2T Chain:A ((15-313))-------------LSRVALGTWAIGGW-MWGGPDDDNGVRTIHAALDEGINLIDTAPVYGFGHSEEIVGRALAEKP--NKAHVATKLGLHWVGEDEKNMKVFRDSRPARIRKEVEDSLRRLRVETIDLEQIHWPDDKTPIDESARELQKLHQDGKIRALGVSNFSPEQMDIFREVAPLATIQPPLNLFERTIEKDILPYAEKHNAVVLAYGALCRGLLTGKMNRDTTFPKDDLRSNDPKFQKPNFEKYLAAMDEFEKLAEKRGKSVMAFAVRWVLDQGPVIALW-GARKPGQVSGVKDVFGWSLTDEEKKAVDDIL-


General information:
TITO was launched using:
RESULT:

Template: 3N2T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1518 -146328 -96.39 -501.12
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain A : 0.81

3D Compatibility (PKB) : -96.39
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.81
QMean score : 0.539

(partial model without unconserved sides chains):
PDB file : Tito_3N2T.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3N2T-query.scw
PDB file : Tito_Scwrl_3N2T.pdb: