Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFQKKTYAVFLILLLMMFTAACSGSKTSAEKKESETEKSSDIAQVKIKDVSYTLPSKYDKSTSDDQLVLKVNVAVKNTGKDPLNVDSMDFTLYQGDTKMSD--------TDPEDYSEKLQGSTINADKSVEGNLFFVVDKGKQYELNYTPESYGDKKPKSVTFKIDGKDKKILATADKLQDSAKALSAYVDVLLFGKDNADFEKITGANKNEIVNDFNESAKDGYLSASGLSSTYADSKALDNIVNGIKEGLSKNSSIQAKTTSISKDEAIVEATVKPVDASSLSDRIEDKVKDYYSKNSSASYEEAVKYALQVYPEEFKKLGPASSEKTVEVKMKKNDIDQWQLDMDDYRAAELVEAFIKE
4ZXH Chain:A ((1199-1260))----------------------------------------------------TIPAQYLRELSPDQMFDHVLKEAKAINVLPLDADPSDFRLY-FDTYLANGIALQTYFPEPEDF-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4ZXH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 77 -5977 -77.62 -110.69
target 2D structure prediction score : 0.31
Monomeric hydrophicity matching model chain A : 0.57

3D Compatibility (PKB) : -77.62
2D Compatibility (Sec. Struct. Predict.) : 0.31
1D Compatibility (Hydrophobicity) : 0.57
QMean score : 0.506

(partial model without unconserved sides chains):
PDB file : Tito_4ZXH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4ZXH-query.scw
PDB file : Tito_Scwrl_4ZXH.pdb: