Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMARKEWKVLLIEDDPMVQEVNKDFITTVKGVTVCATAGNGEEGMKLIKEEQPDLVILDVYMPKKDGIKTLQEIRKQKLEVDVIVVSAAKDKETISLMLQNGAVDYILKPFKLERMRQALEKYKQYKQKIEANDTLSQEQLDAILNIPQQAVQDLPKGLNHFTMNEVTAFLKQQTASLSAEEVAKALGIARVTARRYLDYLEKTGIIKLDVQYGGVGRPVNRYVLKG
4TMY Chain:A ((4-119))------RVLIVDDAAFMRMMLKDIITKA-GYEVAGEATNGREAVEKYKELKPDIVTMDITMPEMNGIDAIKEIMKIDPNAKIIVCSAMGQQAMVIEAIKAGAKDFIVKPFQPSRVVEALNKVS-------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4TMY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 614 -70360 -114.59 -606.55
target 2D structure prediction score : 0.74
Monomeric hydrophicity matching model chain A : 0.69

3D Compatibility (PKB) : -114.59
2D Compatibility (Sec. Struct. Predict.) : 0.74
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.504

(partial model without unconserved sides chains):
PDB file : Tito_4TMY.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4TMY-query.scw
PDB file : Tito_Scwrl_4TMY.pdb: