Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLMNEFEKACETLRKFMAYMLEK-DMKSWTELWDENAVFEFPYAPEGSPKRIEGKAAIYDYIKDYPKQIHLSSFTAPTVYRSADSNTVIAEFQCDGHVIETGLPYRQSYISVIETRDGRIVRYRDYWNPLVVKEAFGGSFLQTEESGK
4J9A Chain:A ((2-123))---NAKEIVVHALR-----LLENGDARGWSDLFHPEGVLEYPYPPPGYKTRFEGRETIWAHMRLFPEYMTIR-FTDVQFYETADPDLAIGEFHGDGVLTASGGKLAYDYIAVWRTRDGQILLYRLFFNPLR-----------------


General information:
TITO was launched using:
RESULT:

Template: 4J9A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 504 -52566 -104.30 -434.43
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain A : 0.75

3D Compatibility (PKB) : -104.30
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.536

(partial model without unconserved sides chains):
PDB file : Tito_4J9A.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4J9A-query.scw
PDB file : Tito_Scwrl_4J9A.pdb: