Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MLLSKKSEYKTLSTVEHPQYIVFCDFDETYFPHTIDEQKQQDIYELEDYLEQKSKDGELIIGWVTGSSIESILDKMGRGKFRYFPHFIASDLGTEITYFSEHNFGQQDNKWNSRINEGFSKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQ--DEINDKKNLLAIEKICEEYGVSVNINRCNPLAGDPEDSYDVDFIPIGTGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGNGYLLKNATQEAKNLHNLITDSEYSKGITNTLKKLIGS 1TJ4 Chain:A ((3-225)) ------------------QLLLISDLDNTWV------GDQQALEHLQEYL--GDRRGNFYLAYATGRSYHSA-RELQKQVGLMEPDYWLTAVGSEI-YHPE----GLDQHWADYLSEHWQRDILQAIADGFEA-----LKPQSPLEQNPWKISYHLDPQACPTVIDQ-----LTEMLKETGIPVQVIFSS--------GKDVDLLPQRSNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVRNAQPELLHWYDQWGDSRHYRA-----------

General information: TITO was launched using: RESULT: Template: 1TJ4.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1179 -72699 -61.66 -328.95 target 2D structure prediction score : 0.66 Monomeric hydrophicity matching model chain A : 0.74 3D Compatibility (PKB) : -61.66 2D Compatibility (Sec. Struct. Predict.) : 0.66 1D Compatibility (Hydrophobicity) : 0.74 QMean score : 0.461

(partial model without unconserved sides chains): PDB file : Tito_1TJ4.pdb: (Unconserved sides chains are recalculated) : Sequence: align-1TJ4-query.scw PDB file : Tito_Scwrl_1TJ4.pdb: