Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKKETAWMKRKQLLYTEERKWEYGTILIEDGICLIENGEGDILLADSLQHSPIWIHHKGKWEQAGFQDKLVLACGAENISLSGGERIRYEKSVKRPLMALLDSLDDETFLAFLQHLHSFGLSVFDCVFSYNKGVFSNTSAGQGVSFYHFSNDTAQCAMQHHYNYSSEG----TGDRF-EWTASNGKRSIMYTAVQRGRK
1W3H Chain:A ((11-86))------------------------------------------------------------------------------------------------------------S--PGLASLADFPIGVAVAASGGNADIFT-SSARQNIVRAEFNQITAENIMKMSYMYSGSNFSFTNSDRLVSWAAQNGQ-------------


General information:
TITO was launched using:
RESULT:

Template: 1W3H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 219 -18776 -85.73 -264.44
target 2D structure prediction score : 0.38
Monomeric hydrophicity matching model chain A : 0.61

3D Compatibility (PKB) : -85.73
2D Compatibility (Sec. Struct. Predict.) : 0.38
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.044

(partial model without unconserved sides chains):
PDB file : Tito_1W3H.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1W3H-query.scw
PDB file : Tito_Scwrl_1W3H.pdb: