Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKIVRIETFPLFHRLEKPYGDANGFKRYRTCYLIRIITESGIDGWGECVD--------------WLPALHVGFTKRIIPFL---LGKQAGSRLSLVRTIQKWHQRAASAVSMALTEIAAKAADCSVCELWGGRYREEIPVYASFQSYSDSPQWISRSVSNVEAQLKKGFEQIKVKIGGTSFKEDVRHINALQHTAGSSITMILDANQSYDAAAAFKWERYFSEWTNIGWLEEPLPFDQPQDYAMLRSRLSVPVAGGENMKGPAQYVPLLSQRCLDIIQPDVMHVNGIDEFRDCLQLARYFGVRASAHAYDGSLSRLYALFAQACLPPWSKMKNDHIEPI-EWDVMENPFTDLVSLQP---SKGMVHIPKGKGIGTEINMEIVNRYKWDGSAY
4HPN Chain:A ((1-374))MKITAVRTHLLEHRLDTPFESASMRFDRRAHVLVEIECDDGTVGWGECLGPARPNAAVVQAYSGWLIGQDPRQTEKIWAVLYNALRDQGQRGLSLT---------ALSGIDIALWDIKGKHYGASISMLLGGRWRESVRAYATGSFKRDNVDRVSDNASEMAERRAEGFHACKIKIG-FGVEEDLRVIAAVREAIGPDMRLMIDANHGYTVTEAITLGDRAAGF-GIDWFEEPVVPEQLDAYARVRAGQPIPVAGGETWHGRYGMWQALSAGAVDILQPDLCGCGGFSEIQKIATLATLHGVRIVPHVWGTGVQIAAALQFMAAMTP-DPVRVNPIEPIMEFDRTHNPFRQAVLREPLEAVNGVVTIPDGPGLGIEINRDALTEFR------


General information:
TITO was launched using:
RESULT:

Template: 4HPN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2077 -195112 -93.94 -552.72
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain A : 0.76

3D Compatibility (PKB) : -93.94
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.405

(partial model without unconserved sides chains):
PDB file : Tito_4HPN.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4HPN-query.scw
PDB file : Tito_Scwrl_4HPN.pdb: