Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKLKLRLTHLWYKLLMKLGLKSDEVYYIGGSEALPPPLSKDEEQVLLMKLPNGDQAARAILIERNLRLVVYIARKFENTGINIEDLISIGTIGLIKAVNTFNPEKKIKLATYAS--------RCIEN-------------EILMYLRR----NNKIRSE---------------------------VSFDEPLNIDWDGNELLLSDVLGTDDDIITKDIEANVD-KKLLKKALEQLNEREKQIMELRFGLVGEEEKTQKDVADMMGISQSYISRLEKRIIKRLRKEFNKMV
5IPN Chain:F ((63-315))------------------------------GEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLVVKIARRYGNRGLALLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHIVKELNVYLRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVDTPLGGD---SEKALLDILADEKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGYEAATLEDVGREIGLTRERVRQIQVEGLRRLRE------


General information:
TITO was launched using:
RESULT:

Template: 5IPN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain F - contact count / total energy / energy per contact / energy per residue : 512 -51096 -99.80 -255.48
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain F : 0.70

3D Compatibility (PKB) : -99.80
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.526

(partial model without unconserved sides chains):
PDB file : Tito_5IPN.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5IPN-query.scw
PDB file : Tito_Scwrl_5IPN.pdb: