Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQMNRYDQAATLRAKMEKRERVLPMVYSQKAKTLAVISGKGGVGKSNITLNMALALQDKGKKVLLIDLDIGMGNIDILIG--NSSSATIIDVLTDRKPLLQSLSVGPKGLR-YISGGTGLDVMFQLDQRKWTFFANELSHALSQFDYVLFDMGAGLSKDQLPFILSAEDILIITTPEPTAIMDAYSAVKHLVLTENKLSMKVAVNRCRDQKEGLDAFARLSRTIHMFLDVQVQFAGSVSDDVIVSKAVVEQVPFFIKSPQAKASRSVRILADALFEREETRHKEDKQTFIEKLSSFLMRRA
4V03 Chain:A ((2-177))------------------------------AEVIVITSGKGGVGKTTLTANIGTALAKLGKKVLLIDAD---RNLDMILGLENRIVYDILDVLEGRVPYEKALVKDKRGLSLWLLP--------VIDIEKWNKTVEEIKNS-GNYDYILVDSPAGIEKGFQIAVSPADKALIVVNPEVSSIRDA-DRVIGLLESMDKRNYKVIVNRIK---------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4V03.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 846 -95022 -112.32 -586.55
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : -112.32
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.523

(partial model without unconserved sides chains):
PDB file : Tito_4V03.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4V03-query.scw
PDB file : Tito_Scwrl_4V03.pdb: