Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVKIFIDPGHGGSDPGATGNGLQ--EKTLTLQIALALRTILTNEYEGVSLLLSRTSDQYVSLNDRTNAANNWGADFFLSIHVNSGGGTGF---ESYIYPDVGAPTTTYQSTIHSEVIQAVDFADRGKKTANFHVLRESAMPALLTENGFIDTVSDANKLKTSSFIQSLARGHANGLEQAFNLKKTSSSGLYKVQIGAFKVKANADSLASNAEAKGFDSIVLLKDGLYKVQIGAFSSKDNADTLAARAKNAGFDAIVILES
1JWQ Chain:A ((1-179))MKVVVIDAGHGAKDSGAVGISRKNYEKTFNLAMALKVESIL-KQNPKLEVVLTRSDDTFLELKQRVKVAENLKANVFVSIHANSSGSSASNGTETYYQR---SASKAFANVMHKYFAPATGLTDRGIRYGNFHVIRETTMPAVLLEVGYLSNAKEEATLFDEDFQNRVAQGIADGITEYLDVK-----------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1JWQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 998 -81651 -81.81 -469.26
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain A : 0.71

3D Compatibility (PKB) : -81.81
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.71
QMean score : 0.430

(partial model without unconserved sides chains):
PDB file : Tito_1JWQ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1JWQ-query.scw
PDB file : Tito_Scwrl_1JWQ.pdb: