Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQIKIKYLDETQTRINKMEQGDWIDLRAAEDVAIKKDEFKLVPLGVAMELPEGYEAHVVPRSSTYKNFGVIQTNSMGVIDESYKGDNDFWFFPAYALRDTKIKKGDRICQFRIMKKMPAVDLIEVDRLGNGDRGGHGSTGTK
2Y1T Chain:A ((1-128))MQIKIKYLDETQTRINKMEQGDWIDLRAAEDVAIKKDEFKLVPLGVAMELPEGYEAHVVPRSSTYKNFGVIQTNSMGVIDESYKGDNDFWFFPAYALRDTKIKKGDRICQFRIMKKMPAVDLIEVDRL--------------


General information:
TITO was launched using:
RESULT:

Template: 2Y1T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 533 -69978 -131.29 -546.70
target 2D structure prediction score : 0.52
Monomeric hydrophicity matching model chain A : 0.97

3D Compatibility (PKB) : -131.29
2D Compatibility (Sec. Struct. Predict.) : 0.52
1D Compatibility (Hydrophobicity) : 0.97
QMean score : 0.466

(partial model without unconserved sides chains):
PDB file : Tito_2Y1T.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2Y1T-query.scw
PDB file : Tito_Scwrl_2Y1T.pdb: