Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIDYSQFPRKNILCVDMKSFYASVSAVTMGLNPL--TCYLAVVGNTDRQGSVVLAASPALKKDFGIKTGSRL-FEIPEDPRIHIVNPQMKLFIRVSTEITKLFYRFVPEKCVHTYSIDESFLDAGKE-----DPEEMAKAIQSSMWREFGLMCTVGIGDNMLLSKLALDLESKKTKSGIARWRYEDVPNKLWKVRPLSKMWGIGGRMERNLNRMGISTIGQLAKFPLELLEKKFGIMGNQLYYHAHGIDLSEIGAPLMQGQISFGKSQILLRDYTRSEEIKAVLLEICEEVARRARTHNKVGRTISLGIGYSKDELGGGFHRSKTIDLPTSITMDIYRCCLMLFNKFYSGKTVRSVSVTLSNIEDDVNQQLSLFEVDNEKRRKLGFVMDGIRSKYGSKAILRAVSYTPAGTALQRAGLTGGHKS
4Q43 Chain:A ((3-274))---------RKIIHVDMDCFFA---AVEMRDNPALRDIPIAIGGSRERRGVISTANYPARK--FGVRSAMPTGMALKLCPHLTLLPGRFDAYKEASNHIREIFSRYTSR--IEPLSLDEAYLDVTDSVHCHGSATLIAQEIRQTIFNELQLTASAGVAPVKFLAKIASDMNKPNGQFVIT---PAEVPAFL-QTLPLAKIPGVGKVSAAKLEAMGLRTCGDVQKCDLVMLLKRFGKFGRILWERSQGIDERDVNSERLRK--SVGVERTMAEDIHHWSECEAIIERLYPELERR----------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4Q43.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1209 -3276 -2.71 -12.41
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain A : 0.68

3D Compatibility (PKB) : -2.71
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.425

(partial model without unconserved sides chains):
PDB file : Tito_4Q43.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4Q43-query.scw
PDB file : Tito_Scwrl_4Q43.pdb: