Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEALKRKIEEEGVVLSDQVLKVDSFLNHQIDPLLMQRIGDEFASRFAKDGITKIVTIESSGIAPAVMTGLKLGVPVVFARKHKSLTLTDNLLTASVYSFTKQTESQIAVSGTHLSDQDHVLIIDDFLANGQAAHGLVSIVKQAGASIAGIGIVIEKSFQPGRDELVKLGYRVESLARIQSLEEGKVSFVQEVHS
1P4A Chain:A ((112-234))-------------------------------PSVLSKVGKLFASVFAEREIDVVMTVATKGIPLAYAAASYLNVPVVIVRKD------STVSINYVSGSSNRIQT-MSLAKRSMKTGSNVLIIDDFMKAGGTINGMINLLDEFNANVAGIGVLVE---------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1P4A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 579 -107171 -185.10 -915.99
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain A : 0.71

3D Compatibility (PKB) : -185.10
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.71
QMean score : 0.732

(partial model without unconserved sides chains):
PDB file : Tito_1P4A.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1P4A-query.scw
PDB file : Tito_Scwrl_1P4A.pdb: