Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRLERLNYNKIKIFLTLDDLTDRGLTKEDLWKDSFKVHQLFKDMMNEANTELGFEANGPIAVEVYSLQAQGMVVIVTKNQDADSEDDEYDDDYIEMQVKLDESADIIYQFHSFEDIIQLSESLQRIGITGG--TVYHYDGQYFLSLE--DLGSHTAEGVVAVLAEYGNPTTLTIYRLQEYGKLIMDGNAVETIQTHFS
2Y1R Chain:I ((5-97))-----------------------------------------------------------------------------------------------------QKLQFVLRFGDFEDVISLS----KLNVNGSKTTLYSFENRYYLYVDFCNMTDEEVENQLSILLEYATESSISIHRLEEYGKLIISEHALETIKKHFA


General information:
TITO was launched using:
RESULT:

Template: 2Y1R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain I - contact count / total energy / energy per contact / energy per residue : 423 -25473 -60.22 -286.21
target 2D structure prediction score : 0.72
Monomeric hydrophicity matching model chain I : 0.69

3D Compatibility (PKB) : -60.22
2D Compatibility (Sec. Struct. Predict.) : 0.72
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.592

(partial model without unconserved sides chains):
PDB file : Tito_2Y1R.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2Y1R-query.scw
PDB file : Tito_Scwrl_2Y1R.pdb: