Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMYDTIVIGAGQAGISIGYYLKQSD--QKFIILDKSHEVGESWKDRY----------------------------------DSLVLFTSRMYSSLPGMHLEGEKHGFPSKNEIVAYLKKYVKKFEIPIQLRTEVISVLKIKNYFLI-KTN---R---EEYQTKNLVIATGPFHTPNIPSISKDLSD----NINQLHSSQYKNSKQLAYGNVLVVGGGNSGAQIAVELSKE-RVTYLACSNKLVYFPLMIGKRSIFWWFDKLGVLHASHTSIVGKFIQKKGDPVFGHELKHAIKQKEIILKKRVIAAK--QNEIIFKDSSTL-EVNNIIWATGFRNPLCWINIKG------VLDQEGRIIHH-RGVS---PVEGLYFIGLPWQHKRGSALLQGVGNDAEYIVKQMNGE
2GV8 Chain:A ((6-359))IRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWNYTSTLSNKLPVPSTNPILTTEPIVGPAALPVYPSPLYRDLQTNTPIELMGYCDQSFKPQTLQFPHRHTIQEYQRIYAQPLLPFIKLATDVLDIEKKDGSWVVTYKGTKAGSPISKDIFDAVSICNGHYEVPYIPNIKGLDEYAKAVPGSVLHSSLFREPELFVGESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGGGDIQ-------------N----------------------------------ESLQQVPEITKFDPTTREIYLKGGKVLSNIDRVIYCTGYLYSVPFPSLAKLKSPETKLIDDGSHVHNVYQHIFYIPDPTLAFVGLALHV----VPFPTSQAQAAFLARVWSG-


General information:
TITO was launched using:
RESULT:

Template: 2GV8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1492 24426 16.37 83.37
target 2D structure prediction score : 0.52
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : 16.37
2D Compatibility (Sec. Struct. Predict.) : 0.52
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.473

(partial model without unconserved sides chains):
PDB file : Tito_2GV8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2GV8-query.scw
PDB file : Tito_Scwrl_2GV8.pdb: