Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMMLNMIRRLLMTCLFLLAFGTTFLSVSGIEAKDLSKWVQEHQEKHLKHAGLRLKALQQKQTQTTSAAEDKTKPLEEAFDWDEYPVQRVTATGYTAGAESTGKNPGDPLYGLTYSGVKVKRDLYSTVAADPSVFPIGTILF--IP---NYG---------LGVVADTGSAIKGNRLDLYFETVKDV------YNEWGKKTLDVYVIKKGTGKITEDELEKLNETKSLQVFRNQYKTVKE
2AE0 Chain:X ((256-337))---------------------------------------------------------------------------------------------------------------------------ASVASDRSIIPPGTTLLAEVPLLDNNGKFNGQYELRLMVALDVGGAIKGQHFDIYQGIGPEAGHRAGWYNHYGR----VWVLKTAP-----------------------------


General information:
TITO was launched using:
RESULT:

Template: 2AE0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain X - contact count / total energy / energy per contact / energy per residue : 172 -10240 -59.53 -165.16
target 2D structure prediction score : 0.48
Monomeric hydrophicity matching model chain X : 0.63

3D Compatibility (PKB) : -59.53
2D Compatibility (Sec. Struct. Predict.) : 0.48
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.209

(partial model without unconserved sides chains):
PDB file : Tito_2AE0.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2AE0-query.scw
PDB file : Tito_Scwrl_2AE0.pdb: