Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKNVAIVGDGGHGKVIRELINARSDTRLAAVLDDKFKTFEGGKEWYTGPPKAVTEL---RRLIPDVL-FLIAVGNNSVRKQLAERLGLGKDDFITLIHPSAIVSKSAVIGEGTVIMAGAIIQADARIGAHCIINTGAVAEHDNQISDYVHLSPRATLSGAVSVQEGAHVGTGASVIPQIIIGAWSIVGAGSAVIRSIPDRVTAAGAPARIISSIQTSNKG
4M99 Chain:A ((5-206))-RKLAVIGAGGHGKVVAELAAALGTYGEIVFLDDRTQ------GSVNGFPVIGTTLLLENSLSPEQFDITVAVGNNRIRRQITENAAALGFKLPVLIHPDATVSPSAIIGQGSVVMAKAVVQAGSVLKDGVIVNTAATVDHDCLLDAFVHISPGAHLSGNTRIGEESRIGTGACSRQQTTVGSGVTAGAGAVIVCDIPDGMTVAGNPAK-----------


General information:
TITO was launched using:
RESULT:

Template: 4M99.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1216 -30707 -25.25 -155.08
target 2D structure prediction score : 0.40
Monomeric hydrophicity matching model chain A : 0.77

3D Compatibility (PKB) : -25.25
2D Compatibility (Sec. Struct. Predict.) : 0.40
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.478

(partial model without unconserved sides chains):
PDB file : Tito_4M99.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4M99-query.scw
PDB file : Tito_Scwrl_4M99.pdb: