Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKTASKFSVMFFMLLALCGCWDVKDIEQLSFARGLAIDETNDHQYKLTYQNLLPQSEDSQASGKPEFVNVTSHGKTILEAVSDVSIKDPPVYSDHLKVILLGEKLMRNQNVDQVLNHFIRDDELRRSSYLMAARGNAADVFTKGNPNQQQPMPSEKLIDLTTHSGYNGKIMIPLRIGRASVYSQNGYSYLIQAVKNEKGKAKYDGAGIIKRGSNKLVGFLSADETQTLSWVMGTIQGGVMPTTDKGHPITFEIKKSKTKIKPVIENGKPVFHISVKTKGILTEDQNPNENSFSKSYLHRLENIFEKKLERDVKQVMDKLQHEYKTDPVFLSDHIRIQHPDYWNKVKGHWDEIFSETDFKYDISFKIINFGTVGK
3OC9 Chain:A ((131-208))---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GMLPVVDFNGKILYE-KKDKPYMAP---NGHGGLFKALKDNGIL---EFMNEKGIKYSVAHNVDNILCKDVDPNMIGYMDLLQSE----------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3OC9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 112 -5096 -45.50 -65.33
target 2D structure prediction score : 0.38
Monomeric hydrophicity matching model chain A : 0.57

3D Compatibility (PKB) : -45.50
2D Compatibility (Sec. Struct. Predict.) : 0.38
1D Compatibility (Hydrophobicity) : 0.57
QMean score : 0.174

(partial model without unconserved sides chains):
PDB file : Tito_3OC9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3OC9-query.scw
PDB file : Tito_Scwrl_3OC9.pdb: