Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKIAVINGGTRSGGNTDVLAEKAVQGFDAEHIYLQKYPIQPIEDLRHAQGGFRPVQDDYDSIIERILQCHILIFATPIYWFGMSGTLKLFIDRWSQTLRDPRFPDFKQQMSVKQAYVIAVGGDNPKIKGLPLIQQFEHIFHFMGMSFKGYVLGEGNRPGDILRDHQALSAASRLLKRSDAI
3GFR Chain:A ((3-106))--MLVINGTPRKHGRTRIAASYIAALYHTDLIDLSEF-VLPVFNGEAEQSELLKVQE----LKQRVTKADAIVLLSPEYHSGMSGALKNALDFLSS-----------EQFKYKPVALLAVAG-----------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3GFR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 446 -59875 -134.25 -575.72
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : -134.25
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.420

(partial model without unconserved sides chains):
PDB file : Tito_3GFR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3GFR-query.scw
PDB file : Tito_Scwrl_3GFR.pdb: