Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMMNWRALSQTKQDRIWSEVNKIIKWKPGSRCHHIIPPDPYRVFDISSAMSSKAGHNDVSGVLSDLETSILKAFQLGTGKNDVMYALDWQHDGYTFSPHQAMPKDEFGEWPVPVFPNGDYYFFFHQDFSWGLLGDPWKCAITVFGEELLEAIDNDPPILFRNK
1CHM Chain:B ((91-116))----------------------------------------------------------------------------VGTDNIVYT-DWQRDNYFAAIQQALPK-----------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1CHM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 27 -1874 -69.39 -72.06
target 2D structure prediction score : 0.46
Monomeric hydrophicity matching model chain B : 0.55

3D Compatibility (PKB) : -69.39
2D Compatibility (Sec. Struct. Predict.) : 0.46
1D Compatibility (Hydrophobicity) : 0.55
QMean score : 0.185

(partial model without unconserved sides chains):
PDB file : Tito_1CHM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1CHM-query.scw
PDB file : Tito_Scwrl_1CHM.pdb: