Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSEQVETRLTPRERLTRGLAYSAVGPVDVTRGLLELGVGLGLQSARSTAAGLRRRYREGRLAREVAAAQETLAQELTAAQDVVANLPQALQDARTQRRSKHHLWIFAGIAAAILAGGAVAFSIVRRSSRPEPSPRPPSVEVQPRS |
3J3V Chain:Q ((12-73)) | ----------------------------------------------------KRRKKVLKLAKGYFGSKHTLYK--VANQQVMKSGNYAFRDRRQKKRDFRKLWITRINAAARMNG----------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3J3V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 8030 for 282 contacts (28.5/contact) +
2D Compatibility (PS) -6625 + (NN) -1271 + (LL) 4728
1D Compatibility (HY) -2000 + (ID) 1000
Total energy: 1862.0 ( 6.60 by residue)
QMean score : 0.215
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