Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MADCDSVTNSPLATATATLHTNRGDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGGPSGPFYDGAVFHRVIQGFMIQGGDPTGTGRGGP---GYKFADEFHPELQFDKPYLLAMANAGPGTNGSQFFITVGKTPHLNRRHTIFGEVIDAESQRVVEAISKTATD-GNDRPTDPVVIESITIS
2A2N Chain:A ((23-175))
---------------SAIIHTSMGDIHTKLFPVECPKTVENFC--------VHSRNG-------YYNGHTFHRIIKGFMIQTGDPTGTGMGGESIWGGEFEDEFHSTLRHDRPYTLSMANAGSNTNGSQFFITVVPTPWLDNKHTVFGRV--TKGMEVVQRISNVKVNPKTDKPYEDVSIINITV-
General information:
TITO was launched using:
RESULT:
Template:
2A2N.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -79019 for 1173 contacts (-67.4/contact) +
2D Compatibility (PS) -16007 + (NN) -9810 + (LL) 124
1D Compatibility (HY) -12400 + (ID) 3950
Total energy: -121062.0 ( -103.21 by residue)
QMean score : 0.623
(partial model without unconserved sides chains):
PDB file :
Tito_2A2N.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2A2N-query.scw
PDB file :
Tito_Scwrl_2A2N.pdb
: