Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRLTHPTPCPENGETMIDRRRSAWRFSVPLVCLLAGLLLAATHGVSGGTEIRRSDAPRLVDLVRRAQASVNRLATEREALTTRIDSVHGRSVDTALAAMQRRSAKLAGVAAMNPVHGPGLVVTLQDAQRDANGRFPRDASPDDLVVHQQDIEAVLNALWNAGAEAIQMQ---DQRIIAMSIARCVGNTLLLNG-RTYSPPYTIAAIGDA--AAMQAALAAAPLVTLYKQYVVRFGLGYCEEVHPDLQIVGYADPVRMHFAQPAGPLDY |
| 4Q2D Chain:A ((382-485)) | -------------------------------------------------------------------------------------------------------------------------------------RYPEDVVVVNLVHGHSDLSALLQELRQKGEEIFQLQGVYDEALGDEQLGAVVAGQWFTRGKRALLPPYGVGTVDQALLAVLQVKHVFVRLFALSTKTVI------VDEVH------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Q2D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -14182 for 540 contacts (-26.3/contact) +
2D Compatibility (PS) -10280 + (NN) -5356 + (LL) 10368
1D Compatibility (HY) -7600 + (ID) 1450
Total energy: -28500.0 ( -52.78 by residue)
QMean score : -0.009
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