Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTTRLQAPVAVTPPLPTRRNAELLLLCFAAVITFAALLVVQANQDQGVPWDLTSYGLAFLTLFGSAHLAIRRFAPYTDPLLLPVVALLNGLGLVMIHRLDLVDNEIGEHRHPSANQQMLWTLVGVAAFALVVTFLKDHRQLARYGYICGLAGLVFLAVPALLPAALSEQNGAKIWIRLPGFSIQPAEFSKILLLIFFSAVLVAKRGLFTSAGKHL------LGMTLPRPRDLAPL-LAAWVISVGVMVFEKDLGA--SLLLYTSF--LVVVYLATQRFSWVVI-GLTLFAAGTLVAYFIFEHVRLRVQTWLDPFADPDGTGYQIVQSLFSFATGGIFGTGLGNGQPDTVPAASTDFIIAAFGEELGLVGLTAILMLYTIVIIRGLRTAIATRDSFGKLLAAGLSSTLAIQLFIVVGGVTRLIPLTGLTTPWMSYGGSSLLANYILLAILARISHGARRPLRTRPRNKSPITAAGTEVIERV |
3BG1 Chain:B ((290-424)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EIEQIFLYLLLNDVVRASKLAIESKNGHLSVLISYLGSNDPRIRDLAELQLQKW--STGGCSIDKNISKIYKLLSGSPFEGLFSLKELESEFSWLCLLNLTL-CYGQIDEYSLESLVQSHLDKFSLPYDDPIGVIFQL------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3BG1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -68847 for 739 contacts (-93.2/contact) +
2D Compatibility (PS) -11982 + (NN) 2459 + (LL) 26920
1D Compatibility (HY) -10000 + (ID) 2000
Total energy: -63450.0 ( -85.86 by residue)
QMean score : 0.164
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