Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAGDTTITIVGNLTADPELRFTPSGAAVANFTVASTPRIYDRQTGEWKDGEALFLRCNIWREAAENVAESLTRGARVIVSGRLKQRSFETREGEKRTVIEVEVDEIGPSLRYATAKVNKASRSGGFGSGSRPAPAQTSSASGDDPWGSAPASGSFGGGDDEPPF
1UE7 Chain:A ((3-124))
--GDTTITIVGNLTADPELRFTPSGAAVANFTVASTPRIYDR------DGEALFLRCNIWREAAENVAESLTRGARVIVSGRLKQR----------TVIEVEVDEIGPSLRYATAKVNKASRSG----------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1UE7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -59448 for 653 contacts (-91.0/contact) +
2D Compatibility (PS) -11697 + (NN) -5544 + (LL) -32
1D Compatibility (HY) -12400 + (ID) 5150
Total energy: -94271.0 ( -144.37 by residue)
QMean score : 0.403
(partial model without unconserved sides chains):
PDB file :
Tito_1UE7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1UE7-query.scw
PDB file :
Tito_Scwrl_1UE7.pdb
: