Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGDLSISQVSARPGRIGIRARQMFDGYRFQRGPVLVVVEDGRISAVDFAGSACPDMNLVDLGESTLLPGLVDAHAHLCWDPDGRPEDLAG-DPHAVLVG-RARRHAAAALRSGITTIRDLGDRDYAALALREEYRQKTTVGPELVVSGPPLTRSGGH-----------------------CWFLG--GVADSVEELVDAVQERAARGADWIKVMATGGFVTTASDPWQPQYGSGQLAAVVAAAEQVGLPVTAHAHATAGIAAAVAAGVDGIEHCTFLSEGSAAASPDVVEAIVAQGVWCGMTIPRVYPEMPENLVAVVQDGWRNIRRL-----------IDAGARVALSTDAGVAPGRRHDVLPDDLVY-LSRHGFTSTEVLTGATAAAAASCG-LGHRKGRIAPGYDADLLAVAAGVDHDPAGLCDVKA---VWRSGTQVPLQASAVGYNTPS |
| 4C60 Chain:A ((103-460)) | -----------------------------------------------------------------LMPGLWDCHMHFGGDDDYYNDYTSGLATHPASSGARLARGCWEALQNGYTSYRDLAGY---GCEVAKAINDGTIVGPNVYSSGAALSQTAGHGDIFALPAGEVLGSYGVMNPRPGYWGAGPLCIADGVEEVRRAVRLQIRRGAKVIKVMASGGVMSRDDNPNFAQFSPEELKVIVEEAARQNRIVSAHVHGKAGIMAAIKAGCKSLEHVSYADE-------EVWELMKEKGILYVATRSVIEIFLASNGEGLVKESWAKLQALADSHLKAYQGAIKAGVTIALGTD--TAPGGPTAL---ELQFAVERGGMTPLEAIKAATANAPLSVGPQAPLTGQLREGYEADVIALEENPLEDIKVFQEPKAVTHVWKGG---------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4C60.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -139730 for 2804 contacts (-49.8/contact) +
2D Compatibility (PS) -34362 + (NN) -14845 + (LL) 4424
1D Compatibility (HY) -17200 + (ID) 5450
Total energy: -207163.0 ( -73.88 by residue)
QMean score : 0.433
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