Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTGLLLAAILAPLAASIASLITGWRRTTATLTALSATTVLACAVAMGFWMGSGAQFGLGGLLRADALTVVMLVVIGIVGTLATAASIGYIDTELAHGHIDGRSARLYGVLTPAFLCAMVLAVCANNIGVIWVAIEATTVITAFLVGHRRTRTALEATWKYVVICSVGIAVAFLGTVLLYFAARDSGAAAAGALNLDILAEHAAGLDPGVARLAGGLLLI-GYGA-KAGLFPFHTWLADAHSQAPAPVSALMSGVLLAVAFSVLIRLRPILDAVSGPAYLRNGLLVVGLATLLVAVLMLTVTGDVKRMLAYSSMEHMGLIAIAAAAGTTLAIAALLLHVLAHGIGKTVLFLAGGQLQAAHDSTAIADITGVMRRSRLIGVSFAVGLIVLLGLPPFAMFASELAIARSLANERLAWVLGAALLLIAIGFTALARNSGRMLLGTPAAGAPAITVPATAAAALMVGIVVSAALGITAGPLADLLGIAASNVGLP |
4EP5 Chain:A ((4-109)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGIDPGITHLGLGVVAVEGKGALKARL--LHGEVVKTSPQEPAKERV---GRIHARVLEVLHRFRPEAVAVEE---------AYKVGWALGAVLVAAFEAGVP-VYAYGPMQ-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4EP5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -67265 for 623 contacts (-108.0/contact) +
2D Compatibility (PS) -9890 + (NN) -5674 + (LL) 34716
1D Compatibility (HY) -5200 + (ID) 1700
Total energy: -55013.0 ( -88.30 by residue)
QMean score : 0.229
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