Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSVYKHAPSRVRLRQTRSTVVKGRSGSLSWRRVRTGDLGLAVWGGREEYRAVKPGTPGIQPKGDMMTVTVVDAGPGRVSRSVEVAAPAAELFAIVADPRRHRELDGSGTVRGNIKVPAKLVVGSKFSTKMKLFGLPYRITSRVTALKPNELVEWSHPLGH-RWRWEFESLSPTLTRVTETFDYHAAGAIKNGLKFYEMTGFAKSNAAGIEATLAKLSDQYARGRA |
2M47 Chain:A ((10-114)) | --------------------------------------------------------------------------------SINIAAPINQVYALVSDITRTGEW-SPVCEKCWWDEDEGPVVGAHFTGRNVTPERTWETRSEVIVAEPNRCFGWSVTDGNVKWIYSMEPLEEG-TVLTESWEFTPKG-------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2M47.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -9150 for 626 contacts (-14.6/contact) +
2D Compatibility (PS) -11116 + (NN) -3354 + (LL) 6712
1D Compatibility (HY) -5200 + (ID) 1350
Total energy: -23458.0 ( -37.47 by residue)
QMean score : 0.214
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