Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRYLPVSTRRIWVNPLCHFSFTVISGALFVSARRYDSNMLANSREELVEVFDALDADLDRLDEVSFEVLSTPE--RLRSLERLECLARRLPAAQHTLINQLDTQASEEELGGTLCCALANRLRITKPEAGRRSAEAKP
1FVI Chain:A ((7-100))
-----------------------------------------------------LAATLENIEDVQFPCLATPKIAGIRSVKQTQMLSRTFKPIRNSVMNRLLTELLPEGSDGEISIEGA-------------------
General information:
TITO was launched using:
RESULT:
Template:
1FVI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6488 for 298 contacts (-21.8/contact) +
2D Compatibility (PS) -6069 + (NN) 3658 + (LL) 5444
1D Compatibility (HY) -5200 + (ID) 900
Total energy: -9555.0 ( -32.06 by residue)
QMean score : 0.152
(partial model without unconserved sides chains):
PDB file :
Tito_1FVI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FVI-query.scw
PDB file :
Tito_Scwrl_1FVI.pdb
: