Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTLKVKGEGLGAQVTGVDPKNLDDITTDEIRDIVYTNKLVVLKDVHPSPREFIKLGRIIGQIVPYYEPMY-HHEDHPEIFVSSTEEGQGVPKTGAFWHIDYMFMPEPFAFSMVLPLAVPGHDRGTYFIDLARVWQSLPAAKRDPARGTVSTHDPRRHIKIRPSDVYRPIGEV---WDEINRTTPPIKWPTVIRHPKTGQEILYICATGTTKIEDKDGNPVDPEVLQELMAATGQLDPEYQSPFIHTQHYQVGDIILWDNRVLMHRAKHGSAAGTLTTYRLTMLDGLKTPGYAA |
| 1GQW Chain:A ((11-274)) | ------GPYIGAQISGAD-RPLSDNQFEQLYHAVLRHQVVFLRDQAITPQQQRALAQRFGEL--HIHPVYPHAEGVDEIIVLDTHNDN--PPDNDNWHTDVTFIETPPAGAILAAKELPSTGGDTLWTSGIAAYEALSVPFRQLLSGLRAEHDFRKSF---PEYKYRKTEEEHQRWREAVAKNPPLLHPVVRTHPVSGKQALFVNEGFTTRIVDVSEK--ESEALLSFLFA-HITKPEFQVRW----RWQPNDIAIWDNRVTQHYANADYLPQRRIMHRATIL---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GQW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -115611 for 2088 contacts (-55.4/contact) +
2D Compatibility (PS) -27913 + (NN) -13924 + (LL) 1692
1D Compatibility (HY) -6000 + (ID) 3750
Total energy: -165506.0 ( -79.27 by residue)
QMean score : 0.493
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