Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSHTDLTPCTRVLASSGTVPIAEELLARVLEPYSCKGCRYLIDAQYSATEDSVLAYGNFTIGESAYIRSTGHFNAVELILCFNQLAYSAFAPAVLNEEIRVLRGWSIDDYCQHQLSSMLIRKASSRFRKPLNPQ-KFSARLLCRDLQVIERTWRYLKVPCVIEFWDENGGAASGEIELAALNIP |
3QOO Chain:A ((64-124)) | -------------------------------------------------------------------------------------------------------------------FVSVGVRSEVHNLAPAVLGDDVTFTVTVDRVE-----GN--RVVLSMKADDPHGPVATGLQERVVVST- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QOO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -6485 for 332 contacts (-19.5/contact) +
2D Compatibility (PS) -6297 + (NN) -186 + (LL) 9284
1D Compatibility (HY) 1200 + (ID) 350
Total energy: -2834.0 ( -8.54 by residue)
QMean score : 0.272
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