Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRRVVRYLSVVVAITLMLTAESVSIATAAVPPLQPIPGVASVSPANGAVVGVAHPVVVTFTTPVTD---RRAVERSIRISTPHNTTGHFEWVASNVVRWVPHRYWPPHTRVSVGVQELTEGFETGDALIGVASISAHTFTVSRNG----------EVLRTMPASLGKPSRPTPIGSFHAMSKERTVVMDSRTIGIPLNSSDGYLLTAHYAVRVTWSGVYVHSAPWSVNSQGYANVSHGCINLSPDNAAWYFDAVTVGDPIEVVG
4K73 Chain:A ((41-270))
--------------------------------------VASVLPTRGQVVGVAHPVVVTFSAPITNPANRHAAERAVEVKSTPAMTGKFEWLDNDVVQWVPDRFWPAHSTVELSVGSLSSDFKTGPAVVGVASISQHTFTVSIDGVEEGPPRVHFGEDGVMPASMGRPEYPTPVGSYTVLSKERSVIMDSS----------GYRLSVDYAVRITSRGLYVHSAPWALPALGLENVSHGCISLSREDAEWYYNAVDIGDPV----
General information:
TITO was launched using:
RESULT:
Template:
4K73.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -110010 for 1484 contacts (-74.1/contact) +
2D Compatibility (PS) -21350 + (NN) -10401 + (LL) 4180
1D Compatibility (HY) -22400 + (ID) 5550
Total energy: -165531.0 ( -111.54 by residue)
QMean score : 0.470
(partial model without unconserved sides chains):
PDB file :
Tito_4K73.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4K73-query.scw
PDB file :
Tito_Scwrl_4K73.pdb
: