Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSNSRRRSLRWSWLLSVLAAVGLGLATAPAQAAPPALSQDRFADFPALPLDPSAMVAQVGPQVVNINTKLGYNNAVGAGTGIVIDP-NGVVLTNNHVIAGATDINAFSVGSGQTYGVDVVGYDRTQDVAVLQLRGAGGLPSAAIGGG--VAVGEPVVAMGNSGGQ---GGTPRAVPGRVVALGQTVQASD-SLTGAEETLNGLIQFDAAIQPGDSGGPVVNGLGQVVGMNTAASDNFQLSQGGQ---GFAIPIGQAMAIAGQIRSGG-------GSPTVHIGPTAFLGLGVVDNNGNGARVQRVVGSAPAASLGISTGDVITAVDGAPINSATAMADALNGHHPGDVISVTWQTKSGGTRTGNVTLAEGPPA |
| 4YNN Chain:A ((64-303)) | ------------------------------------------------------------------------------GSGVIIDPKNGIIITNDHVIRNANLI-TVTLQDGRRLKARLIGGDSETDLAVLKI-DAKNLKSLVIGDSDKLEVGDYVVAIGNPFGLNSFGNSQSATFGIVSAL----KRSDLNIEGVE----NFIQTDAAINPGNAGGALVNAKGELIGINTAIISPY----GGNVGIGFAIPINMAKDVAQQIIKFGSIHRGLMGIFVQHLTPELAQSMGYAE-DFQGALVSQVNQNSPAQLAGLKSGDVIVQINDTKITQAT--------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4YNN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -120470 for 1701 contacts (-70.8/contact) +
2D Compatibility (PS) -24561 + (NN) -11132 + (LL) 6796
1D Compatibility (HY) -15600 + (ID) 4600
Total energy: -169567.0 ( -99.69 by residue)
QMean score : 0.361
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