Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAVVPIRIVGDPVLHTATTPVTVAADGSLPADLAQLIATMYDTMDAANGVGLAANQIGCSLRLFVYDCAADRAMTARRRGVVINPVLETSEIPETMPDPDTDDEGCLSVPGESFPTGRAKWARVTGLDADGSPVSIEGTGLFARMLQHETGHLDGFLYLDRLIG-RYARNAKRAVKSHGWGVPGLSWLPGEDPDPFGH
1S17 Chain:A ((14-176))
-AILNILEFPDPRLRTIAKPVEVVDDA-----VRQLIDDMFETMYEAPGIGLAATQVNVHKRIVVMDLSEDKSEPR----VFINPEFEP--LTEEM---DQYQEGCLSVPGFYENVDRPQKVRIKALDRDGNPFEEVAEGLLAVCIQHECDHLNGKLFVDYLSTLKRDRIRKKLEKQH--------------------
General information:
TITO was launched using:
RESULT:
Template:
1S17.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -81305 for 1270 contacts (-64.0/contact) +
2D Compatibility (PS) -17506 + (NN) -3747 + (LL) -332
1D Compatibility (HY) -12400 + (ID) 3300
Total energy: -118590.0 ( -93.38 by residue)
QMean score : 0.447
(partial model without unconserved sides chains):
PDB file :
Tito_1S17.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S17-query.scw
PDB file :
Tito_Scwrl_1S17.pdb
: